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Microbiome and Malnutrition in Pregnancy

Recruiting
Conditions
Pregnancy Related
Pregnancy Loss
Pregnancy; Parasitic Disease
Breast Feeding
Metabolomics
Pregnancy Complications
Microbial Colonization
Microbial Disease
Parasitic Disease
Malnutrition
Registration Number
NCT04992104
Lead Sponsor
The Hospital for Sick Children
Brief Summary

This study is being conducted to investigate how a mother's nutritional status and her gut microbiome during pregnancy contribute to the birth outcomes and health of her baby. The gut microbiome is the totality of microorganisms (e.g. bacteria, viruses, fungi) living in the gastrointestinal tract. This study will focus on pregnant women, 28 years and younger living in the Toronto and greater Toronto area. The focus is on younger women due to their vulnerability to undernutrition. Pregnant participants, and upon delivery, their newborns will be followed throughout pregnancy and for a year afterwards. Throughout this period, the investigators will collect stool samples, rectal swabs, blood samples, health assessments, nutritional and dietary assessments and birth/ labour details. The goal is to define the relationship between a mother's nutritional status and her microbiome dynamics during pregnancy and how they contribute to the birth outcomes and growth of her newborn. With the hypothesis that alterations of the microbiota in the maternal gut (dysbiosis) exacerbated by nutritional status or pathogen exposure during pregnancy, impacts weight gain because of impaired nutrient absorption, leading to corresponding negative birth outcomes.

Detailed Description

This project represents the first systematic investigation of the impact of the microbiome on nutritional status during pregnancy in young women and directly aligns with global health initiatives focused on this vulnerable cohort. The goal of the study is to define the relationships between host nutritional status and microbiome dynamics during pregnancy and how they contribute to birth outcomes. The gut microbiome has a profound influence on host nutritional status. Dysbiosis (loss of diversity/beneficial microbes and gain of pathobionts) has emerged as a major factor in the development of undernutrition. Despite the importance of nutrition during pregnancy, few studies have examined the role of the microbiome on maternal health and birth outcomes. Further, little is known concerning the influence of enteric eukaryotic microbes, such as parasites, on the bacterial microbiome and host nutrition.

At the core of this study are two complementary cohorts of young women that provide an exceptional opportunity to obtain longitudinal samples to monitor the dynamic relationships between microbiome community structure and function with gut health and host nutritional status. This registration is for the the Toronto cohort of the study, which will focus on refugee and young adult obstetric clinics in Toronto, a population of specific relevance to undernutrition. This cohort is expected to yield insights into the influence of eukaryotic microbes that are often viewed as asymptomatic. The target demographic of the study is young mothers, 28 years of age and younger, in the Toronto and Greater Toronto Area. The investigators have identified this younger demographic due to the lack of knowledge on the microbiome of young women, and their vulnerability to undernutrition. A second complementary cohort will be based in the Matiari district of Pakistan. This project will yield unprecedented insights into the relationships between prokaryotic and eukaryotic microbes in the gut and their associations with maternal health and birth outcomes.

The central hypothesis of the study is that alterations of the microbiota in the maternal gut (dysbiosis) exacerbated by nutritional status or pathogen exposure during pregnancy, impacts weight gain because of impaired nutrient absorption, leading to corresponding negative birth outcomes.

The study will be a prospective, longitudinal, observational study to investigate the impact and relationship between prokaryotic and eukaryotic microbes in the gut and their association with maternal health and birth outcomes among young women, 28 years of age and younger in the Toronto and Greater Toronto Area. The study will aim to recruit 400 women into two groups based on BMI at time of recruitment (Normal BMI will be defined as between 20 and 24.9 kg/m2 and Low BMI will be defined as less than 20 kg/m2). With a goal of having 200 participants within the normal BMI group and 200 participants within the low BMI group. Although this is the recruitment aim, in the event that the investigators are unable to recruit 200 women with a low BMI, more women will be recruited that fall within the normal BMI range. The study will follow women and their infants over the course of their pregnancy and for a year post-partum, collecting stool, rectal and blood samples, nutritional information, heath assessments, anthropometric measurements and empowerment metrics at different time points.

Recruitment & Eligibility

Status
RECRUITING
Sex
Female
Target Recruitment
800
Inclusion Criteria
  1. Consent provided
  2. Participant is between 8-20 weeks post-conception
  3. Female aged 28 years of age and younger
  4. Confirmation of pregnancy
  5. Intend to comply with study procedures and follow up
Exclusion Criteria
  1. Women who do not meet the enrolment age criteria
  2. Women who are 20 + weeks post-conception
  3. Women who have taken antibiotics within the past 3 months Note: it is common practice to give the mother penicillin in perinatal period if they are GBS positive; because this is standardized across the board it would not act as an exclusion factor.

Study & Design

Study Type
OBSERVATIONAL
Study Design
Not specified
Primary Outcome Measures
NameTimeMethod
To assess if alterations of the microbiota in the maternal gut (dysbiosis) are associated with changes in maternal gestational weight gain.8-20 weeks post-conception, 30-34 weeks post conception

The primary endpoint will be the change in maternal gestational weight gain (GWG) during pregnancy, measured between the first (8-20 weeks post-conception) and second time point (30-34 weeks post conception).

Secondary Outcome Measures
NameTimeMethod
Infant growth: weightwithin 24 hours of birth, 3 months, 6 months and 12 months

Measured in kg

Preterm birthWithin 24 hours of birth

noted in labor and birth chart review

StillbirthWithin 24 hours of birth

noted in labor and birth chart review

Birth size: head circumferencewithin 24 hours of birth

Measured in cm

Infant Stool biomarkers: Calprotectin, Lipocalin and Claudin 153 months and 12 months

Markers in the stool for intestinal mass, inflammation, and gut permeability and circulating lipopolysaccharide, among other markers

Anthropometrics: Maternal triceps skinfold thickness8-20 weeks post-conception, 30-34 weeks post-conception, 3-months post-partum, and 12 months post-partum

Measured in cm

Maternal blood biomarkers8-20 weeks post-conception, 30-34 weeks post-conception, and 12 months post-partum

Concentration of HB + MCV, ferritin, and CRP

Infant sexDetermined at delivery

Female or Male

Infant morbidity3 months, 6 months and 12 months

Assessed through infant health assessment questionnaires

Reported maternal medication use8-20 weeks post-conception, 30-34 weeks post-conception, within 24 hours of delivery, 3-months post-partum, 6 months post-partum and 12 months post-partum

\[Questionnaire\]

Anthropometrics: Maternal middle upper arm circumference8-20 weeks post-conception, 30-34 weeks post-conception, 3-months post-partum,and 12 months post-partum

Measured in cm

Infant blood biomarkers12 months

Concentration of HB + MCV, ferritin, and CRP

Maternal morbidity8-20 weeks post-conception, 30-34 weeks post-conception, 3 months post-partum, 6 months post-partum and 12 months post-partum

Assessed through health assessment questionnaires

Infant growth: mid upper arm circumferencewithin 24 hours of birth, 3 months, 6 months and 12 months

Measured in cm

Reported Infant medication usewithin 24 hours of birth, 3 months, 6 months and 12 months

\[Questionnaire\]

Self-efficacy3 months post-partum and 12 months post partum

Self-efficacy will be measured using the Generalized Self-Efficacy scale, developed by Schwarzer and Jerusalem

Anthropometrics: Maternal BMI8-20 weeks post-conception, 30-34 weeks post-conception, delivery, 3-months post-partum, 6 months post-partum and 12 months post-partum

calculated using weight and height; BMI = kg/m2

Anthropometrics: Maternal height8-20 weeks post conception, 30-34 weeks post conception, delivery, 3 months post-partum and 12 months post partum

Measured in cm

Anthropometrics: Maternal weight8-20 weeks post conception, 30-34 weeks post conception, delivery, 3 months post-partum and 12 months post-partum

Measured in kg

Infant growth: head circumferencewithin 24 hours of birth, 3 months, 6 months and 12 months

Measured in cm

Breast feeding: amount and initiation of complementary feedingwithin 24 hours of birth, 3 months, 6 months and 12 months

Based off of WHO 2010 Guidelines: Indicators for assessing infant and young child feeding practices (Part 2 Measurement)

Dietary diversity8-20 weeks post conception, 30-34 weeks post conception, 3 months post-partum and 12 months post partum

Minimum Dietary Diversity Score for Women (MDD-W)

Household annual food insecurity3 months post-partum and 12 months post-partum

Food insecurity will be assessed using the Household Food Insecurity Access Scale (HFIAS)

Perceived decision making3 months post-partum and 12 months post partum

Questions pertaining to perceived decision-making are from the Pakistan Demographic and Health Survey (PDHS)

Perceived social support3 months post-partum and 12 months post partum

Perceived social support will be measured using the Multi-dimensional Scale of Perceived Social Support (MSPSS), developed by Zimet et al.

Infant growth: lengthwithin 24 hours of birth, 3 months, 6 months and 12 months

Measured in cm

Infant growth: triceps skinfold thicknesswithin 24 hours of birth, 3 months, 6 months and 12 months

Measured in cm

Infant Gestational age8-20 weeks post conception

Will be documented at baseline visit.

Maternal ageDocumented at 8-20 weeks post-conception

24 years or younger

Maternal dietary intake8-20 weeks post conception, 30-34 weeks post conception and 12 months post partum

Assessed through ASA 24 HR Dietary Recall system, completed 2x each time point

Maternal demographics8-20 weeks post-conception

Questions pertaining to demographic data are adapted from the Pakistan Demographic and Health Survey (PDHS)

Food insecurity8-20 weeks post conception, 3 months post partum and 12 months post partum

Questionnaire developed by Hager, E.R., et al., Development and validity of a 2-item screen to identify families at risk for food insecurity.

Small for gestational ageWithin 24 hours of birth

noted in labor and birth chart review

Maternal stool biomarkers: Calprotectin, Lipocalin and Claudin 158-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

Markers in the stool for intestinal mass, inflammation, and gut permeability and circulating lipopolysaccharide, among other markers

Maternal: incidence of pathobionts8-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

As identified through 16S, 18S and ITS rDNA surveys

Infant: incidence of pathobionts3 months and 12 months

As identified through 16S, 18S and ITS rDNA surveys

Infant: gut bacterial profile as measured through 16S rDNA sequence surveys3 and 12 months post partum

measured through 16S rDNA sequence surveys

Infant: microbiome taxonomic alpha and beta diversity3 months and 12 months

To define taxonomic diversity, species profiles from 16S, 18S and ITS rDNA data will be clustered to identify differences in community structure across samples. Alpha diversity will be measured through indices such as Chao, Shannon and Simpson indices. Beta diversity will be measured through standard indices such as Bray-Curtis distances.

Infant dietary intake: NutricheQ Questionnaire12 months

NutricheQ questionnaire: a tool designed for toddlers aged 1 to 3 years of age, with a focus on markers for inadequate or excessive intake and dietary imbalances

Perceived parental stress3 months post-partum and 12 months post partum

Perceived parental stress will be measured using the Perceived Stress Scale (PSS-10)

Birth size: lengthwithin 24 hours of birth

Measured in cm

Birth size: weightwithin 24 hours of birth

Measured in kg

Large for gestational ageWithin 24 hours of birth

noted in labor and birth chart review

Delivery assessmentwithin 24 hours of birth

Assessed within 24 hours of birth

Maternal gut bacteria profile as measured through 16S rDNA sequence surveys8-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

measured through 16S rDNA sequence surveys

Infant: blood metallomics profile as measured through ICP-MS (https://www.metabolomicscentre.ca/new_service/25)12 months

Through TMIC platform

Birth defectswithin 24 hours of birth

Assessed within 24 hours of birth

Maternal: metabolomic profile of stool (metabolites involved in central metabolism as analysed by Mass Spectrometry)8-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

Analysis of the core metabolites involved in central metabolism. These metabolites will be analysed through Mass Spec and include short chain fatty acids, amino acids, intermediates in energy metabolism and nucleotide biosynthesis

Infant eukaryotic microbiome profile as measured through 18S and ITS rDNA sequence surveys3 months and 12 months

measured through 18S and ITS rDNA sequence surveys

Maternal: microbiome taxonomic alpha and beta diversity8-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

To define taxonomic diversity, species profiles from 16S, 18S and ITS rDNA data will be clustered to identify differences in community structure across samples. Alpha diversity will be measured through indices such as Chao, Shannon and Simpson indices. Beta diversity will be measured through standard indices such as Bray-Curtis distances.

Maternal: blood metallomics profile as measured through ICP-MS (https://www.metabolomicscentre.ca/new_service/25)8-20 weeks post conception, 30-34 weeks post conception, and 12 months post partum

TMIC Metallomics Platform to be used.

Maternal metabolic pathway expression profile as measured through whole microbiome RNASeq (metatranscriptomics)8-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

measured through whole microbiome RNASeq (metatranscriptomics)

Maternal eukaryotic microbiome profile as measured through 18S and ITS rDNA sequence surveys8-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

measured through 18S and ITS rDNA sequence surveys

Maternal bacterial gene expression profile as measured through whole microbiome RNASeq (metatranscriptomics)8-20 weeks post conception, 30-34 weeks post conception, 3 months post partum and 12 months post partum

The output of these analyses are readouts of microbial gene expression detailing biochemical activities as well as the taxa responsible.

Trial Locations

Locations (2)

St. Michael's Hospital

🇨🇦

Toronto, Canada

The Hospital for Sick Children

🇨🇦

Toronto, Canada

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