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Ileal Pouch Microbiome Study: defining a pre-operative microbiological signature that predisposes to anastomotic leak

Not Applicable
Conditions
lcerative Colitis
Ulcerative Colitis
Surgery - Other surgery
Oral and Gastrointestinal - Inflammatory bowel disease
Registration Number
ACTRN12620000484943
Lead Sponsor
Royal Brisbane Womens Hospital (RBWH)
Brief Summary

Not available

Detailed Description

Not available

Recruitment & Eligibility

Status
ot yet recruiting
Sex
All
Target Recruitment
30
Inclusion Criteria

Ileal pouch surgery without a covering loop ileostomy
J, W or S pouch configuration
Indication must be Ulcerative Colitis
Must be staged (ie. prior total colectomy and ileostomy)

Exclusion Criteria

Age less than 18 years
Inability to give consent
Pregnant

Study & Design

Study Type
Observational
Study Design
Not specified
Primary Outcome Measures
NameTimeMethod
Microbiome profiles in stool.<br>Microbiome profiles in stool will be assessed by 16S rRNA and metagenomic sequencing of microbial genera and species. [Day of surgery (Day 0)];Microbiome sequence profiles in ileal and rectal tissue<br>A biopsy will be collected from the surgical specimen of rectum and ileum and stored frozen at -80 degrees Celcius until assessment of microbial genera and species. Microbial profiles will be assessed by 16S rRNA sequencing[Day of surgery (Day 0) ];Collagenase levels in stool.<br>Collagenase functional activity will be measured by Immuno-assasy (ELISA)<br>Collagenase genomic levels in stool will be measured by metagenomic sequencing[Day 0 (day of surgery)]
Secondary Outcome Measures
NameTimeMethod
Pouchitis<br>Pouchitis will be assessed by clinical examination and pouchoscopy[ After discharge from hospital post surgery (at regular follow up appointments 6 weeks, 6 months, 12 months, 18 months)];fistulating perianal disease<br>Examined by clinical examination and pelvic imaging (CT scan)<br>[6 weeks post surgery and at each postsurgical follow up appointment (6 months, 12 months, 18 months)<br>];Anastomotic leak following surgery<br>Anastomotic leak will be assessed by clinical examination together with blood tests and CT scan[Day 1, Day 2, Day 3, Day 4 and Day 5, post surgery during hospital admission]
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