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Study of COVID-19 Outbreak in Hospital Departments of Bamako, Mali

Not Applicable
Completed
Conditions
Covid19
Interventions
Diagnostic Test: SARS-CoV-2 screening by molecular biology
Diagnostic Test: Serological screening
Registration Number
NCT04710316
Lead Sponsor
Institut National de la Santé Et de la Recherche Médicale, France
Brief Summary

The new coronavirus known as SARS-Cov-2 (severe acute respiratory syndrome -coronavirus 2) was first reported in December 2019 and rapidly became a public health emergency. The COVID-19 pandemic is now affecting sensitive regions with fragile health care systems, such as South America and Africa. Caregivers, in the front line of Covid19 patient management, may accidentally become infected and a source of infection during the incubation phase or in case of asymptomatic infection.

The objectives of this project are thus i) to assess SARS-Cov-2 spread over the hospital departments of Bamako by carrying out a systematic molecular screening of patients and caregivers, ii) to evaluate the feasibility of Point-Of-Care molecular assays in Mali and iii) to estimate the immunity acquired from SARS-Cov-2 among health workers through serological testing, allowing also the assessment of asymptomatic caregiver rate and absence of re-infection among the immunized caregivers. Finally, iv) variability of the virus over time and spread of different variants around the world will be studied by sequencing the viral genome.

Detailed Description

Not available

Recruitment & Eligibility

Status
COMPLETED
Sex
All
Target Recruitment
450
Inclusion Criteria
  • Free and informed consent accepted in writing
  • Patient: patient hospitalized in one of the four hospitals of Bamako, with clinical signs of infection of the upper or lower respiratory tracts (sore throat, cough/sputum, nasal congestion and rhinorrhea, odynophagia, thoracic oppression, dyspnea, desaturation) with fever or feeling of fever or any other signs of SARS-Cov-2 infection (that is to say the following clinical manifestations, of sudden onset: unexplained asthenia, unexplained myalgia, headache without a known migraine disease, anosmia or hyposmia without associated rhinitis, dysgueusia, diarrhea, heart rhythm disorders, acute myocardial injury, severe thromboembolic event) or who have been in close contact with a SARS-CoV-2 infected person without effective protective measures (FFP2/surgical masks or physical separation) and defined as follows: having shared the same place of life as the confirmed case, for example: family, same room or having a direct contact in face to face with less than 1 meter from the confirmed case during a talk; intimate friends; class or office neighbours; adjacent to the index case in a plane or a train; or having provided or received hygiene or care acts from a confirmed case.
  • Caregivers: caregivers of one of the four hospitals of Bamako
Exclusion Criteria
  • Persons subject to legal protection or not able to give a free and informed consent.
  • Caregivers: caregivers not able to follow the project schedule

Study & Design

Study Type
INTERVENTIONAL
Study Design
PARALLEL
Arm && Interventions
GroupInterventionDescription
CaregiversSARS-CoV-2 screening by molecular biologyCaregivers of one of the four centers in Bamako. * Serological screening: all. * Molecular screening: with clinical signs of infection of the upper or lower respiratory tracts with fever or feeling of fever or any other signs of SARS-Cov-2 infection or who have seroconverted to SARS-CoV-2 or who have been in close contact with a SARS-CoV-2 infected person without effective protective measures
PatientsSARS-CoV-2 screening by molecular biology- Hospitalized patients in one of the four centers in Bamako, with clinical signs of infection of the upper or lower respiratory tracts with fever or feeling of fever or any other signs of SARS-Cov-2 infection or who have been in close contact with a SARS-CoV-2 infected person without effective protective measures
CaregiversSerological screeningCaregivers of one of the four centers in Bamako. * Serological screening: all. * Molecular screening: with clinical signs of infection of the upper or lower respiratory tracts with fever or feeling of fever or any other signs of SARS-Cov-2 infection or who have seroconverted to SARS-CoV-2 or who have been in close contact with a SARS-CoV-2 infected person without effective protective measures
Primary Outcome Measures
NameTimeMethod
Incidence rate of positive SARS-Cov-2 RT-PCR in Bamako hospital departments during the studyThrough the completion of subject participation (up to 15 months after study start date).

Positive SARS-Cov-2 RT-PCRs are defined by the detection of SARS-Cov-2 genome after amplification using a test targeting 2 regions of the genome.

Secondary Outcome Measures
NameTimeMethod
Number of SARS-CoV-2 mutations/variants detected during the studyThrough the completion of subject participation (up to 15 months after study start date).
Percentage of SARS-CoV-2 mutations/variants detected during the studyThrough the completion of subject participation (up to 15 months after study start date).
Number of Cepheid Xpert® Xpress SARS-Cov-2 cartridges available for 19.8 USD/number required for the projectThrough the completion of subject participation (up to 15 months after study start date).
Percentage of positive serological tests among the caregivers of the hospital departments of Bamako.Assessed on the fourth serological assay performed (at Month 3).
Percentage of caregivers immunized and re-infected with SARS-CoV-2Through the completion of caregiver participation (up to 15 months after study start date).
Percentage of caregivers asymptomatic but immunized to SARS-CoV-2Assessed on the fourth serological assay performed (at Month 3).

Trial Locations

Locations (4)

Hopital Gabriel Toure

🇲🇱

Bamako, Mali

Hôpital dermatologique de Bamako

🇲🇱

Bamako, Mali

Hôpital du Mali

🇲🇱

Bamako, Mali

Hopital du Point-G

🇲🇱

Bamako, Mali

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