Small Molecule
Enrupatinib (EI-1071) is an investigational, orally bioavailable, and brain-penetrant small molecule engineered as a potent and highly selective inhibitor of the Colony Stimulating Factor-1 Receptor (CSF-1R).[1] Its primary clinical development program is focused on Alzheimer's disease (AD), where it aims to offer a novel disease-modifying therapeutic approach by modulating microglia-mediated neuroinflammation.[3] The rationale for this approach is supported by a growing body of evidence implicating neuroinflammation as a central pillar in the pathophysiology of AD.
The compound has successfully completed a Phase 1 first-in-human study in healthy volunteers, which established a favorable safety and tolerability profile, with all treatment-emergent adverse events in the multiple-dose cohort being mild and unrelated to the drug.[6] Building on these results, Elixiron Immunotherapeutics has initiated a Phase 2 proof-of-concept clinical trial in patients with AD (NCT06745583). This study is strategically designed to use biomarker endpoints, including advanced neuroimaging, to validate target engagement in the central nervous system before proceeding to larger, more resource-intensive efficacy trials.[8]
Beyond neurodegeneration, Enrupatinib has demonstrated significant therapeutic potential in preclinical models of other diseases. It has received Orphan Drug Designation from the U.S. Food and Drug Administration (FDA) for the treatment of Idiopathic Pulmonary Fibrosis (IPF), based on its ability to ameliorate lung fibrosis in animal models.[10] Furthermore, its capacity to reprogram the tumor microenvironment by depleting immunosuppressive tumor-associated macrophages has been demonstrated in oncology models, suggesting potential as a combination therapy with immune checkpoint inhibitors.[11] This report provides a comprehensive analysis of Enrupatinib's chemical properties, mechanism of action, preclinical data, and clinical development strategy, assessing its position within the therapeutic landscape and outlining key future milestones.
The investigational compound is identified by the International Nonproprietary Name (INN) Enrupatinib.[2] Throughout its development, it has been referred to by several codes, most prominently EI-1071 (and its variants EI 1071, EI1071) used by the primary developer, Elixiron Immunotherapeutics.[1] Other identifiers include 4B71-01 and FB-1071, the latter of which is used in clinical trials conducted in China.[3] The compound is cataloged in major drug databases under DrugBank ID DB18486 and has been assigned the Chemical Abstracts Service (CAS) Registry Number 2222689-47-4.[2] Its formal chemical name under IUPAC nomenclature is 6-[3-methoxy-4-[(6-methylpyridin-3-yl)methoxy]anilino]-3-morpholin-4-ylquinoxaline-5-carbonitrile.[13]
Enrupatinib is classified as a small molecule drug.[1] Its molecular formula is $C_{27}H_{26}N_{6}O_{3}$, corresponding to a molecular weight of approximately 482.54 g/mol.[2] In its solid state, it appears as a light yellow to green yellow powder and demonstrates solubility in organic solvents such as dimethyl sulfoxide (DMSO).[2] The compound's structure is unambiguously defined by its Canonical SMILES string (CC1=CC=C(C=N1)COC2=CC=C(C=C2OC)NC3=CC=C4C(=C3C#N)N=C(C=N4)N5CCOCC5) and InChIKey (UGKFKFGVNJJPOL-UHFFFAOYSA-N), which facilitate its identification in chemical and patent databases.[3]
Table 1: Key Identifiers and Physicochemical Properties of Enrupatinib
| Property | Value | Source(s) |
|---|---|---|
| Generic Name (INN) | Enrupatinib | 2 |
| Development Codes | EI-1071, EI 1071, EI1071, 4B71-01, FB-1071 | 1 |
| DrugBank ID | DB18486 | [1, 14] |
| CAS Registry No. | 2222689-47-4 | [2, 13] |
| IUPAC Name | 6-[3-methoxy-4-[(6-methylpyridin-3-yl)methoxy]anilino]-3-morpholin-4-ylquinoxaline-5-carbonitrile | 13 |
| Molecular Formula | $C_{27}H_{26}N_{6}O_{3}$ | [2, 3, 20] |
| Molecular Weight | 482.54 g/mol | [2] |
| Type | Small Molecule | 1 |
| Appearance | Solid, light yellow to green yellow powder | 2 |
Enrupatinib was originally discovered and developed by the Development Center for Biotechnology (DCB) in Taiwan, a notable achievement showcasing the region's advancing capabilities in novel drug discovery.[22] Subsequently, the portfolio for EI-1071 was exclusively licensed to Elixiron Immunotherapeutics, Inc., a US-based clinical-stage biotechnology company with a strategic focus on developing next-generation immunotherapies.[22]
The corporate structure surrounding the drug's development appears to involve regional partnerships. While Elixiron leads the primary development efforts, particularly in the United States and Taiwan, other entities are also associated with the compound. 4B Technologies (Beijing) Co., Limited is listed as an originator and active organization, while Fubei Biotechnology Suzhou Co. Ltd. is noted as a license organization.[3] This structure, combined with the use of a distinct development code (FB-1071) in Chinese clinical trial registries [3], strongly suggests a bifurcated development strategy. It is likely that a Chinese partner is managing clinical development, regulatory filings, and eventual commercialization within Greater China, operating in parallel with Elixiron's core program focused on Alzheimer's disease for Western markets. Such an arrangement can accelerate regional progress and access but may introduce complexities regarding global data integration, regulatory harmonization, and brand strategy in the future.
Enrupatinib's therapeutic activity is derived from its targeted inhibition of the Colony Stimulating Factor-1 Receptor (CSF-1R), also known as c-FMS.[11] CSF-1R is a member of the Class III receptor tyrosine kinase (RTK) family, which also includes other critical signaling proteins such as c-KIT, FMS-like tyrosine kinase-3 (FLT3), and platelet-derived growth factor receptors (PDGFRs).[25] The CSF-1R pathway is activated upon binding of its cognate ligands, CSF-1 (macrophage colony-stimulating factor) or Interleukin-34 (IL-34). This ligand binding induces receptor dimerization and autophosphorylation of its intracellular kinase domain, initiating downstream signaling cascades that are fundamental for the differentiation, proliferation, survival, and function of myeloid lineage cells.[25] Key cell types dependent on this pathway include tissue-resident macrophages, microglia (the resident immune cells of the central nervous system), and osteoclasts, which are involved in bone resorption.[11]
A defining characteristic of Enrupatinib is its combination of high potency and exceptional selectivity for CSF-1R. In vitro assays demonstrate that the drug inhibits CSF-1R with a half-maximal inhibitory concentration ($IC_{50}$) of 3 nM.[11] This potency is superior to that of pexidartinib (PLX3397), an approved CSF-1R inhibitor, which has a reported $IC_{50}$ of 10 nM.[11]
Even more significant is the drug's selectivity profile. In a broad kinase panel screening of 468 assays, Enrupatinib displayed potent, nanomolar-level inhibition of CSF-1R while showing negligible activity against 453 other non-mutant kinases at a concentration of 1 µM.[11] This high degree of specificity is particularly evident when compared to other structurally related Class III RTKs. The compound exhibits greater than 100-fold selectivity over cKit, over 450-fold selectivity over Flt3, over 220-fold selectivity over PDGFRα, and over 6000-fold selectivity over PDGFRβ.[11] This "clean" kinase profile is a crucial molecular attribute. Many kinase inhibitors are limited by off-target toxicities stemming from the inhibition of related kinases. The remarkable selectivity of Enrupatinib minimizes the potential for such off-target effects, which directly contributes to the favorable safety profile observed in both comprehensive preclinical toxicology studies and the first-in-human clinical trial. This robust safety signal is what de-risks the compound's development and provides the confidence to pursue indications requiring chronic administration, such as Alzheimer's disease.
The potent and selective inhibition of CSF-1R by Enrupatinib translates into distinct and therapeutically relevant effects on specific cell populations in different tissues.
A cornerstone of the Enrupatinib program is its ability to penetrate the blood-brain barrier and act on microglia within the central nervous system.[2] In the context of Alzheimer's disease, microglia can adopt an activated, pro-inflammatory state, particularly in the vicinity of amyloid plaques, contributing to a cycle of neuroinflammation and neuronal damage.[5] Preclinical studies show that Enrupatinib effectively modulates this process. It significantly reduces the population of activated, plaque-associated microglia while having a lesser effect on homeostatic microglia, thereby preserving their essential surveillance functions.[6] This targeted immunomodulation leads to a downstream reduction in neuroinflammatory gene expression, including key markers like Trem2 and Iba1, and ultimately protects against neuronal injury.[6]
Within the tumor microenvironment (TME), CSF-1R signaling is a critical survival pathway for tumor-associated macrophages (TAMs), particularly those of the M2 phenotype.[11] These M2 TAMs are largely considered pro-tumorigenic, as they suppress anti-tumor immune responses and promote angiogenesis and metastasis.[11] By blocking CSF-1R, Enrupatinib disrupts this survival signal, leading to a reduction in TAM infiltration into the tumor. This action helps to reprogram the TME from an immunosuppressive to an immune-permissive state, thereby enhancing the efficacy of other immunotherapies.[11]
The drug's mechanism extends to other CSF-1R-dependent cells. In vitro bioassays have confirmed that Enrupatinib inhibits CSF-1R activity in human monocytes, leading to a reduction in their proliferation.[11] It also effectively inhibits the differentiation of osteoclast precursors, a process heavily reliant on CSF-1R signaling, which suggests potential applications in bone-related pathologies.[11] In the lungs, pulmonary macrophages play a role in driving inflammation and tissue remodeling in fibrotic diseases. Enrupatinib's ability to regulate these cells forms the basis of its investigation for Idiopathic Pulmonary Fibrosis.[10]
Enrupatinib has demonstrated a favorable absorption, distribution, metabolism, and excretion (ADME) profile in preclinical studies, indicating its suitability as an orally administered therapeutic. The compound is described as orally active and bioavailable, with high permeability in Caco-2 cell monolayer assays ($P_{app}$ A→B: $6.05 \times 10^{-6}$ cm/s), which is predictive of efficient absorption from the gastrointestinal tract.[11] A critical feature for its primary indication is its demonstrated ability to penetrate the blood-brain barrier, allowing it to reach its target cells (microglia) within the central nervous system.[2]
The molecule shows good metabolic stability in liver hepatocyte assays across multiple species, with a half-life ($T_{1/2}$) of 212.8 minutes in human hepatocytes.[11] Its potential for drug-drug interactions appears low, as it shows minimal inhibition of most major cytochrome P450 (CYP) enzymes, with $IC_{50}$ values greater than 50 µM for CYP1A2, CYP2B6, CYP2C8, CYP2C9, CYP2C19, and CYP2D6. Some moderate interaction was noted with CYP3A4 ($IC_{50}$ of 11.83 µM with midazolam as the substrate), which warrants consideration in clinical use.[11] The drug is highly bound to plasma proteins, with a free fraction in human plasma of 0.98%.[11]
Table 2: Summary of Preclinical ADME and Pharmacokinetic Parameters
| Parameter | Species | Value | Unit | Source(s) |
|---|---|---|---|---|
| Caco-2 Permeability ($P_{app}$ A→B) | N/A | 6.05 | $\times 10^{-6}$ cm/s | 11 |
| Plasma Protein Binding (% Free) | Human | 0.98 | % | 11 |
| Rat | 0.95 | % | 11 | |
| Dog | 0.62 | % | 11 | |
| Hepatocyte Stability ($T_{1/2}$) | Human | 212.8 | minutes | 11 |
| Rat | 101.3 | minutes | 11 | |
| Dog | 182.7 | minutes | 11 | |
| CYP Inhibition ($IC_{50}$) | Human | >50 | µM | 11 |
| (CYP1A2, 2B6, 2C8, 2C9, 2C19, 2D6) | ||||
| CYP3A4 Inhibition ($IC_{50}$) | Human | 11.83 | µM | 11 |
| (Substrate: Midazolam) |
In the 5xFAD transgenic mouse model, which recapitulates key features of Alzheimer's disease pathology, treatment with Enrupatinib demonstrated significant therapeutic effects. The compound led to a marked improvement in cognitive function, as measured by performance in the novel object recognition (NOR) and Y-maze tests.[6] These behavioral improvements were mechanistically linked to pathological changes in the brain, including a significant reduction in activated microglia and neuroinflammation. Furthermore, treatment showed a trend towards a reduction in amyloid plaque burden and neuronal death, providing strong preclinical validation for its disease-modifying potential in AD.[2]
The initial development work for Enrupatinib highlighted its potential as an immuno-oncology agent. In syngeneic mouse models of cancer, oral administration of Enrupatinib at 100 mg/kg effectively reduced the infiltration of pro-tumor TAMs in both MC38 colorectal tumors and EMT6 breast tumors.[11] Critically, Enrupatinib demonstrated synergy with immune checkpoint blockade. When dosed in combination with an anti-PD-1 antibody, it produced an enhanced anti-tumor effect compared to either agent alone, supporting the hypothesis that reprogramming the tumor microenvironment can augment the efficacy of T-cell-directed immunotherapies.[11]
The rationale for investigating Enrupatinib in IPF stems from the central role of pulmonary macrophages in driving the inflammatory and fibrotic processes that characterize the disease.[10] In preclinical animal models of IPF, blockade of the CSF-1R pathway with Enrupatinib yielded promising results, showing an amelioration of lung fibrosis and an improvement in respiratory function.[10] These findings provided the basis for the FDA's decision to grant the compound Orphan Drug Designation for this indication.
Enrupatinib has undergone extensive preclinical safety evaluation and has demonstrated a generally well-tolerated profile.
The observation of liver findings in dogs, a species often considered more predictive of human hepatotoxicity than rodents, is noteworthy. While the 28-day rat study was clean, this species-specific signal warrants careful attention. The competitor CSF-1R inhibitor, pexidartinib, carries an FDA black box warning for the risk of serious and potentially fatal liver injury.[26] Although the Phase 1 human trial of Enrupatinib in healthy volunteers did not reveal safety concerns, the preclinical dog data underscores the necessity for vigilant monitoring of liver function tests in all ongoing and future clinical trials, especially those involving longer-term dosing in patient populations. Establishing a superior liver safety profile compared to pexidartinib would represent a significant clinical and commercial advantage for Enrupatinib.
Enrupatinib's clinical journey began with a first-in-human Phase 1 trial (NCT04238364) designed to evaluate its safety, tolerability, and pharmacokinetics in healthy volunteers.[6] The study, which was successfully completed in 2021, enrolled 58 participants and employed a standard dose-escalation design, comprising both single ascending dose (SAD) and multiple ascending dose (MAD) cohorts.[4]
The primary outcome of the study was positive, with Enrupatinib demonstrating that it was well-tolerated. In the MAD portion of the trial, all reported treatment-emergent adverse events (TEAEs) were classified as Grade 1 (mild) in severity and were assessed by investigators as being unrelated to the study drug.[6] These favorable results established a strong safety foundation for the compound and supported the decision to advance its development into patient populations for chronic diseases like Alzheimer's.[6]
Building on the successful Phase 1 trial, Elixiron has initiated a Phase 2 study (NCT06745583) to investigate Enrupatinib in its primary target indication of Alzheimer's disease.
The trial is an open-label, exploratory, non-randomized, single-group assignment study designed as a proof-of-concept investigation.[3] Sponsored by Elixiron Immunotherapeutics, the study is actively recruiting an estimated 15 participants at Taipei Veterans General Hospital in Taiwan.[3] The target population consists of male and female subjects aged 50 to 85 years with a clinical diagnosis of mild, moderate, or severe AD, defined by NIA-AA criteria and a Clinical Dementia Rating (CDR) score of $\geq0.5$.[8] Participants will receive an oral dose of 448.2 mg of EI-1071 twice daily for 28 days.[8] The study is estimated to run from December 2024 to June 2026.[8]
The design of this Phase 2 trial represents a highly strategic, modern, and capital-efficient approach to drug development in the challenging field of neurodegeneration. Rather than focusing on clinical efficacy endpoints like cognitive scores, which would require a large, long, and costly trial, this study is centered on biomarker-based proof-of-mechanism.[8]
The primary goal is to validate that Enrupatinib engages its target in the human brain and produces the intended biological effect. This will be assessed directly by measuring the change in activated microglia using Positron Emission Tomography (PET) imaging with a tracer for the 18 kDa translocator protein (TSPO), a marker upregulated in activated microglia and astrocytes.[8] A secondary goal is to evaluate the drug's effect on a panel of inflammatory biomarkers in blood and/or cerebrospinal fluid that are associated with AD progression.[8] By focusing on these objective biological readouts in a small cohort over a short duration, Elixiron can obtain a clear go/no-go signal. A positive result, demonstrating a reduction in the TSPO PET signal, would provide strong evidence of target engagement and significantly de-risk the program, attracting the investment and partnerships necessary for a large-scale pivotal Phase 3 trial. Conversely, a negative result would allow for an early termination of the program, saving substantial resources.
In parallel with the main development program, at least two Phase 1 studies have been registered in China using the development code FB-1071, further evidencing a regional development strategy.
Table 3: Overview of the Enrupatinib Clinical Trial Program
| Trial ID | Drug Code | Phase | Status | Population | N | Design | Primary Objectives / Goal |
|---|---|---|---|---|---|---|---|
| NCT04238364 | EI-1071 | 1 | Completed | Healthy Volunteers | 58 | SAD/MAD | Assess safety, tolerability, and PK |
| NCT06745583 | EI-1071 | 2 | Recruiting | AD Patients | 15 | Open-label, single-arm | Assess safety and proof-of-mechanism via TSPO PET imaging and biomarkers |
| CTR20230290 | FB-1071 | 1 | Recruiting | Healthy Chinese Volunteers | N/A | Randomized, placebo-controlled | Assess safety, tolerability, and PK of a single dose |
| CTR20230343 | FB-1071 | 1 | Completed | Healthy Chinese Volunteers | N/A | Open-label | Assess food effect on PK |
The strategic pivot of Enrupatinib's development towards Alzheimer's disease aligns with the evolving scientific consensus that neuroinflammation is not merely a consequence of neurodegeneration but a critical driver of the disease process, alongside amyloid-beta and tau pathologies.[30] By targeting microglia, the primary immune effectors in the brain, Enrupatinib represents a promising disease-modifying strategy.[5] Its mechanism is distinct from and potentially complementary to anti-amyloid antibody therapies, offering an opportunity to address a different aspect of the complex pathophysiology of AD.[12]
Enrupatinib is entering a dynamic but challenging therapeutic area. While the field of neuroinflammation in AD is burgeoning with various approaches (e.g., TREM2 agonists, NLRP3 inflammasome inhibitors), the landscape of CSF-1R inhibitors specifically for AD is less crowded. The key competitive advantages for Enrupatinib will be its demonstrated brain penetrance, high selectivity, favorable safety profile established in Phase 1, and convenient oral route of administration, which is particularly important for a chronic disease requiring long-term treatment.
Elixiron appears to be pursuing a "beachhead" strategy, leveraging the validated biology of CSF-1R inhibition in rarer diseases to secure regulatory advantages and build corporate value, while dedicating its primary resources to the high-risk, high-reward AD indication.
On August 2, 2022, the U.S. FDA granted Orphan Drug Designation to EI-1071 for the treatment of IPF.[10] This designation provides valuable development incentives, including potential market exclusivity, tax credits, and waiver of application fees. The designation was supported by compelling preclinical data showing that Enrupatinib could ameliorate lung fibrosis.[10] Despite this regulatory milestone, there are currently no active clinical trials for Enrupatinib in IPF, suggesting that this indication may be pursued at a later date or represents an opportunity for a strategic partnership.[3]
TGCT is a rare, benign tumor of the joints characterized by the overexpression of the CSF1 ligand, making it an ideal target for CSF-1R inhibitors.[28] The therapeutic hypothesis is clinically validated, with two FDA-approved drugs for this indication: pexidartinib (Turalio) and, more recently, vimseltinib (Romvimza).[28] Enrupatinib is listed in industry pipeline reports as being in development for TGCT.[35] Its primary path to market in this space would be to demonstrate a superior safety profile, particularly in relation to the known risk of hepatotoxicity associated with pexidartinib.[28]
Table 4: Competitive Landscape of CSF-1R Inhibitors in Development and on Market
| Drug Name | Company | Approved/Highest Phase | Key Indication(s) | Potency (IC50) | Key Differentiators / Safety Issues |
|---|---|---|---|---|---|
| Enrupatinib (EI-1071) | Elixiron Immunotherapeutics | Phase 2 | AD, IPF, TGCT | 3 nM | High selectivity; Favorable Phase 1 safety; Brain-penetrant |
| Pexidartinib (Turalio) | Daiichi Sankyo | Approved | TGCT | 10 nM | First-in-class oral agent for TGCT; Black box warning for hepatotoxicity |
| Vimseltinib (Romvimza) | Daiichi Sankyo | Approved | TGCT | N/A | Selective inhibitor; Favorable safety profile vs. pexidartinib; No cholestatic hepatotoxicity observed |
The initial preclinical research for Enrupatinib provided a strong rationale for its use in immuno-oncology.[11] Its ability to deplete immunosuppressive TAMs and synergize with anti-PD-1 therapy positions it as a promising candidate for combination treatments across various solid tumors. However, the company's current clinical focus has clearly shifted away from oncology and towards neuroinflammatory and immunological diseases. This area remains a significant opportunity for future development, most likely through out-licensing or partnership with a larger oncology-focused company.
Elixiron has demonstrated strategic acumen in advancing the Enrupatinib program. The company has successfully secured substantial non-dilutive funding and prestigious validation from the Alzheimer's Association's "Part the Cloud" program, which is supported by Bill Gates, receiving at least $1.8 million across two grants to fund the Phase 1 and Phase 2 trials.[3] The drug has also gained recognition from the Bill Gates-founded Global Neurodegeneration Proteomics Consortium.[12] This external validation is a powerful signal of scientific merit to the broader investment community. To fund its clinical ambitions, Elixiron has also completed pre-B and B rounds of venture financing from a consortium of investors, including the international Lotte Holdings.[12] The company's pipeline clearly prioritizes Enrupatinib for AD, while listing other indications like IPF and Amyotrophic Lateral Sclerosis (ALS) as earlier-stage opportunities, with a named partner (4B Technologies) for ALS.[42]
The trajectory of the Enrupatinib program will be defined by several key upcoming events.
Enrupatinib (EI-1071) is a scientifically compelling and well-differentiated CSF-1R inhibitor with best-in-class potential rooted in its high potency and selectivity. The development program, steered by Elixiron Immunotherapeutics, is strategically sound, focusing on the high-impact field of Alzheimer's disease while employing a modern, biomarker-driven approach to mitigate risk. The primary challenge is not the drug itself, but the formidable nature of the AD indication.
For all stakeholders, the key recommendation is to focus intently on the biomarker data from the ongoing Phase 2 trial. This readout will serve as the crucial proof-of-concept and will be the most reliable predictor of the drug's ultimate probability of success. The secondary indications, particularly IPF and TGCT, should be viewed as valuable, lower-risk strategic assets. They provide diversification, a potential faster path to a first market approval, and significant partnership opportunities that can fund the more ambitious and long-term development in Alzheimer's disease.
Published at: November 1, 2025
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