Small Molecule
C21H28N6O2
779353-01-4
Dinaciclib (DB12021, SCH 727965) is an investigational, second-generation, small-molecule inhibitor of cyclin-dependent kinases (CDKs) developed by Merck & Co. Structurally classified as a pyrazolo[1,5-a]pyrimidine, Dinaciclib exhibits potent, low-nanomolar inhibitory activity against a specific subset of CDKs, primarily targeting CDK1, CDK2, CDK5, and CDK9. This multi-targeted mechanism of action results in two synergistic antineoplastic effects: the inhibition of cell cycle-related kinases (CDK1, CDK2) induces cell cycle arrest at the G1/S and G2/M transitions, while the inhibition of transcriptional kinases (CDK9) leads to the rapid downregulation of critical anti-apoptotic proteins, most notably Mcl-1, thereby triggering potent apoptosis. This dual mechanism conferred significant and broad antitumor activity across a wide range of preclinical cancer models, including those for leukemia, multiple myeloma, and various solid tumors, where it demonstrated a superior therapeutic index compared to the first-generation pan-CDK inhibitor, flavopiridol.
The promising preclinical data propelled Dinaciclib into extensive clinical evaluation. The most encouraging signals of clinical activity were observed in hematologic malignancies, particularly in relapsed/refractory chronic lymphocytic leukemia (CLL) and multiple myeloma (MM), where single-agent responses were achieved even in high-risk patient populations. This early success led to the granting of Orphan Drug designation for CLL by both the U.S. Food and Drug Administration (FDA) and the European Medicines Agency (EMA). However, the drug’s clinical development was ultimately challenged by a narrow therapeutic window. The same broad-spectrum CDK inhibition responsible for its efficacy also led to significant on-target toxicities in healthy, rapidly proliferating tissues, resulting in a safety profile characterized by frequent Grade 3/4 neutropenia, gastrointestinal adverse events, and a notable risk of tumor lysis syndrome.
In solid tumors, Dinaciclib monotherapy proved largely ineffective, failing to demonstrate superiority over standard-of-care agents in randomized Phase II trials for advanced breast cancer and non-small cell lung cancer. The pivotal Phase III trial in refractory CLL (NCT01580228) was terminated for futility, as Dinaciclib did not meet the primary endpoint of improving progression-free survival compared to ofatumumab. This outcome, coupled with the broader clinical success of highly selective third-generation CDK4/6 inhibitors in breast cancer, led to a strategic shift in the field away from broad-spectrum CDK inhibition. Consequently, the sponsor withdrew the Orphan Drug designations for Dinaciclib in 2022, effectively concluding its primary development path as a monotherapy. Dinaciclib remains an investigational agent, with its future potential residing in rationally designed combination therapies that may leverage its potent pro-apoptotic mechanism to overcome resistance or synergize with other targeted agents in biomarker-selected patient populations. Its development trajectory serves as an important case study in the evolution of targeted oncology, illustrating the transition from broad-spectrum inhibitors to precision medicines with wider therapeutic indices.
This section establishes the fundamental chemical and physical identity of Dinaciclib, providing a comprehensive reference for its nomenclature, molecular structure, and key properties. This foundational data is essential for ensuring unambiguous identification across scientific literature and databases and for understanding the basic characteristics that influence its formulation and experimental use.
Dinaciclib is known by a variety of systematic names, registry numbers, and developmental codes, which are cataloged here to provide a definitive reference.
The primary non-proprietary name for the compound is Dinaciclib.[1] Its systematic International Union of Pure and Applied Chemistry (IUPAC) name is 2-pyrazolo[1,5-a]pyrimidin-5-yl]piperidin-2-yl]ethanol.[1] An alternative IUPAC name, (S)-3-(((3-Ethyl-5-(2-(2-hydroxyethyl)piperidin-1-yl)pyrazolo[1,5-a]pyrimidin-7-yl)amino)methyl)pyridine 1-oxide, is also reported.[2]
For cross-referencing in major biomedical and chemical databases, Dinaciclib is assigned the DrugBank accession number DB12021 [1] and the Chemical Abstracts Service (CAS) Registry Number 779353-01-4.[1]
During its development by Schering-Plough and later Merck & Co., the compound was referred to by several developmental codes and aliases. The most common of these are SCH 727965 (and its variant SCH-727965) and MK-7965 (and its variant MK 7965). Other reported aliases include CDK Inhibitor SCH 727965 and PS-095760.[2]
Additional key identifiers used in specific databases and regulatory systems include:
Dinaciclib is a synthetic organic small molecule belonging to the pyrazolo[1,5-a]pyrimidine class of heterocyclic compounds.[1] This core chemical scaffold is a well-established ATP-mimetic motif known to effectively bind to the hinge region of various protein kinases, providing a structural basis for Dinaciclib's mechanism of action as a kinase inhibitor.[14] The molecule is specifically a pyrazolo[1,5-a]pyrimidine substituted at positions 3, 5, and 7 with ethyl, (2S)-2-(2-hydroxyethyl)piperidin-1-yl, and [(1-oxidopyridin-3-yl)methyl]amino groups, respectively.[1]
The molecular formula of Dinaciclib is C21H28N6O2.[1] This corresponds to a calculated average molecular weight of approximately 396.49 to 396.5 g/mol (or Da) and a monoisotopic mass of 396.227374166 Da.[1]
The two-dimensional structure of the molecule is unambiguously represented by standard chemical line notations. The isomeric Simplified Molecular Input Line Entry System (SMILES) string, which specifies the stereochemistry at the chiral center on the piperidine ring, is CCC1=C2N=C(C=C(N2N=C1)NCC3=C[N+](=CC=C3)[O-])N4CCCC[C@H]4CCO.[1] The standard International Chemical Identifier Key (InChIKey), a hashed representation used for database searching, is
PIMQWRZWLQKKBJ-SFHVURJKSA-N.[1]
Calculated physicochemical properties suggest that Dinaciclib possesses favorable "drug-like" characteristics. It adheres to Lipinski's Rule of Five, with zero violations reported, indicating a good potential for oral bioavailability, although it has been developed for intravenous administration.[13] Key computed properties include a logarithmic partition coefficient (AlogP) of 2.28, a topological polar surface area (TPSA) of 92.63 Ų, and seven rotatable bonds.[4] These values place it within the typical range for small-molecule kinase inhibitors.
In its solid state, Dinaciclib is described as a white to light brown powder or a crystalline solid.[7] Its solubility profile is characteristic of many kinase inhibitors, showing good solubility in polar aprotic organic solvents but limited solubility in aqueous media. It is reported to be soluble in dimethyl sulfoxide (DMSO) to concentrations of at least 50 mM, in dimethylformamide (DMF) at 25 mg/mL, and in ethanol at 25 mg/mL.[5] Its solubility in aqueous buffers such as phosphate-buffered saline (PBS) is significantly lower, necessitating the use of specific formulation vehicles for administration in preclinical and clinical settings.[7] For
in vivo animal studies, a common vehicle used was 20% hydroxypropyl-β-cyclodextran.[15]
For long-term storage, it is recommended that the solid compound be kept at -20°C under desiccating conditions to ensure chemical stability.[5] For shipping, the product is typically transported on blue ice to maintain a cold chain.[5]
Table 1: Summary of Dinaciclib Identifiers and Physicochemical Properties
Property | Value | Source(s) |
---|---|---|
Primary Name | Dinaciclib | 1 |
IUPAC Name | 2-pyrazolo[1,5-a]pyrimidin-5-yl]piperidin-2-yl]ethanol | 1 |
DrugBank ID | DB12021 | 1 |
CAS Number | 779353-01-4 | 1 |
Developmental Code | SCH 727965, MK-7965 | 7 |
Molecular Formula | C21H28N6O2 | 1 |
Average Molecular Weight | 396.495 g/mol | 2 |
Monoisotopic Mass | 396.227374166 Da | 1 |
Isomeric SMILES | CCC1=C2N=C(C=C(N2N=C1)NCC3=CN+[O-])N4CCCC[C@H]4CCO | |
InChIKey | PIMQWRZWLQKKBJ-SFHVURJKSA-N | |
Physical Form | Crystalline solid; white to light brown powder | |
Solubility (DMSO) | Soluble up to 50 mM | |
AlogP | 2.28 | |
Polar Surface Area | 92.63 Ų | |
Lipinski's Rule of Five | 0 violations |
Dinaciclib exerts its antineoplastic effects through the potent and selective inhibition of multiple members of the cyclin-dependent kinase (CDK) family. As a second-generation inhibitor, it was designed for improved potency and a cleaner selectivity profile compared to earlier agents like flavopiridol. Its mechanism is characterized by a dual impact on cancer cells: direct interference with cell cycle progression and simultaneous disruption of transcriptional programs that support cell survival. This multi-pronged attack at the molecular level explains the potent cytotoxicity observed in preclinical models.
Dinaciclib functions as an ATP-competitive inhibitor, binding to the ATP pocket of its target kinases to block their catalytic activity. X-ray crystallography studies of Dinaciclib in complex with CDK2 have revealed an elaborate network of binding interactions within the ATP site, which accounts for its extraordinary potency and selectivity.
Its primary targets are a specific subset of CDKs, against which it demonstrates inhibitory activity in the low-nanomolar range. Cell-free kinase assays have consistently determined the following 50% inhibitory concentration (IC50) values for its highest-potency targets:
In addition to these high-potency targets, Dinaciclib also inhibits other CDKs, albeit with lower potency. For instance, it inhibits Cyclin D/CDK4 complexes with an IC50 of 100 nM. While this is significantly less potent than its activity against CDK1/2/5/9, an integrated analysis that considers clinically achievable drug concentrations predicts that Dinaciclib functions
in vivo as a broad-spectrum inhibitor, effectively targeting CDK2, CDK3, CDK4, CDK6, and CDK9.
A key feature of Dinaciclib's design is its improved selectivity over first-generation inhibitors. It shows little to no inhibitory activity against a panel of 41 other diverse kinases when tested at a concentration of 10 µM. Notably, it lacks significant activity against GSK3-β (
IC50 = 800 nM), an off-target effect associated with the toxicity of flavopiridol. This refined selectivity profile was a critical factor in its selection for clinical development.
The inhibition of this specific set of CDKs triggers profound and pleiotropic effects on cancer cell biology, primarily manifesting as cell cycle arrest and the induction of programmed cell death (apoptosis).
The loss of cell cycle control is a fundamental hallmark of cancer, and Dinaciclib directly targets the machinery responsible for this dysregulation. By potently inhibiting CDK1 and CDK2, which are essential for navigating critical cell cycle checkpoints, Dinaciclib effectively halts cellular proliferation. This is evidenced by several key downstream effects observed in treated cells:
Beyond simply halting proliferation (a cytostatic effect), Dinaciclib is a potent inducer of apoptosis (a cytotoxic effect). This is achieved through the activation of the cell's intrinsic suicide program. Mechanistically, Dinaciclib-induced apoptosis involves the activation of both the extrinsic (death receptor-mediated) and intrinsic (mitochondrial-mediated) pathways, as evidenced by the cleavage and activation of initiator caspases (caspase-8 and caspase-9) and executioner caspases (caspase-3 and caspase-7). The activation of these executioner caspases leads to the cleavage of key cellular substrates, including Poly(ADP-ribose) polymerase (PARP), a hallmark of apoptosis that is consistently observed following Dinaciclib treatment.
A critical and distinct component of Dinaciclib's mechanism of action is its potent inhibition of transcriptional CDKs, particularly CDK9. CDK9 forms the catalytic core of the positive transcription elongation factor b (P-TEFb) complex. P-TEFb is required for the productive elongation of transcription by RNA Polymerase II, and it is especially critical for the expression of genes with short-lived mRNA and protein products.
Many key survival proteins that protect cancer cells from apoptosis, such as Mcl-1 and Bcl-2, fall into this category. By inhibiting CDK9, Dinaciclib effectively shuts down the transcriptional machinery required to maintain the levels of these pro-survival factors. This leads to a rapid and potent downregulation of Mcl-1 at both the mRNA and protein levels. The loss of Mcl-1, a critical anti-apoptotic member of the Bcl-2 family, sensitizes the cell to apoptotic stimuli and is a central driver of Dinaciclib's cytotoxic activity, particularly in hematologic malignancies like CLL and MM, which are often highly dependent on Mcl-1 for their survival.
This mechanism also explains Dinaciclib's ability to overcome the protective effects of the tumor microenvironment. In diseases like CLL, stromal cells and T-cells secrete cytokines (e.g., CD40 ligand, BAFF) that signal CLL cells to upregulate Mcl-1, thereby promoting their survival and contributing to drug resistance. Dinaciclib can abrogate this protective effect by directly inhibiting the production of Mcl-1, rendering the cancer cells vulnerable to apoptosis despite the presence of these pro-survival signals.
The combination of direct cell cycle arrest via CDK1/2 inhibition and potent apoptosis induction via CDK9-mediated Mcl-1 suppression represents a powerful dual attack on cancer cells. However, this broad-spectrum activity is a double-edged sword. CDKs are not only active in cancer cells; they are essential for the proliferation of healthy, rapidly dividing tissues, such as hematopoietic progenitor cells in the bone marrow and the epithelial lining of the gastrointestinal tract. The potent inhibition of CDK1 and CDK2 in these normal tissues is the direct cause of the significant on-target toxicities, such as neutropenia and gastrointestinal distress, that were consistently observed in clinical trials. Similarly, the potent cytotoxic effect driven by CDK9 inhibition, while desirable against tumors, contributes to the risk of severe tumor lysis syndrome in patients with a high disease burden. Thus, the very mechanism that confers Dinaciclib's preclinical potency is also what narrows its therapeutic window in humans, creating a significant challenge for achieving a dose that is both effective against the tumor and tolerable for the patient. This fundamental challenge ultimately limited its clinical success and illustrates why the field of oncology has largely pivoted towards more highly selective inhibitors that target pathways more specifically dysregulated in cancer versus normal tissue.
In addition to its primary mechanism as a CDK inhibitor, further research has uncovered other potential modes of action for Dinaciclib that may contribute to its overall biological activity.
Structural and biochemical studies have revealed that Dinaciclib can interact with the acetyl-lysine recognition site of bromodomains, specifically the bromodomain testis-specific protein (BRDT). Bromodomains are "reader" modules that recognize acetylated lysine residues on histones and other proteins, playing a key role in regulating chromatin structure and gene expression. This finding suggests that Dinaciclib may also function as a protein-protein interaction inhibitor, a mechanism distinct from its ATP-competitive kinase inhibition. This interaction with an epigenetic reader module could represent a previously unrecognized aspect of its pharmacology.
Furthermore, Dinaciclib has been shown to inhibit the unfolded protein response (UPR). The UPR is a cellular stress response pathway activated by an accumulation of unfolded or misfolded proteins in the endoplasmic reticulum. While initially a pro-survival response, chronic or overwhelming UPR activation can trigger apoptosis. In many cancers, the UPR is co-opted to help malignant cells cope with the high protein synthesis demands of rapid proliferation and to adapt to stressful microenvironments. Dinaciclib's inhibition of the UPR is reported to be dependent on its activity against CDK1 and CDK5, linking this effect back to its primary targets. By disrupting this key survival pathway, Dinaciclib may further lower the threshold for apoptosis in cancer cells.
Table 2: Inhibitory Activity (IC50) of Dinaciclib Against Key Cyclin-Dependent and Other Kinases
Target Kinase | IC50 (nM) | Source(s) |
---|---|---|
CDK2 / cyclin E | 1 | |
CDK5 / p25 | 1 | |
CDK1 / cyclin B | 3 | |
CDK9 / cyclin T | 4 | |
CDK4 / cyclin D | 100 | |
GSK3-β | 800 | |
ERK2 | 4100 | |
Other Kinases (Panel of 41) | Little or no inhibition at 10,000 nM |
The clinical utility of a drug is determined not only by its molecular mechanism but also by its absorption, distribution, metabolism, and excretion (ADME) profile—collectively known as pharmacokinetics (PK)—and its biological effect on the body—its pharmacodynamics (PD). Studies of Dinaciclib have characterized its PK/PD profile, revealing a drug with rapid distribution and a short half-life that nonetheless achieves dose-dependent target engagement in patients.
Dinaciclib has been developed for intravenous (IV) administration, thereby bypassing issues of oral absorption and first-pass metabolism. In clinical trials, it has typically been administered as a 2-hour infusion.
Pharmacokinetic analyses conducted during Phase I clinical trials in patients with advanced malignancies demonstrated that Dinaciclib exhibits rapid distribution into tissues following IV infusion. It is characterized by a short plasma half-life, meaning the drug is cleared from the bloodstream relatively quickly. This pharmacokinetic behavior was consistent across multiple studies, and a Phase II trial in breast cancer patients confirmed that no drug accumulation occurred with repeated dosing on a 21-day cycle.
Metabolism of Dinaciclib occurs primarily in the liver. Preclinical data indicate that it is a substrate of the cytochrome P450 enzyme CYP3A4, which raises the potential for drug-drug interactions with potent inhibitors or inducers of this enzyme. However, a clinical study investigating the co-administration of Dinaciclib with aprepitant, a known modulator of CYP3A4, found no clinically significant effect on Dinaciclib's pharmacokinetics, suggesting that such interactions may be manageable. The drug and its metabolites are ultimately eliminated from the body through both hepatic and renal (kidney) excretion pathways.
A critical aspect of early-phase clinical trials is to confirm that a drug is engaging its intended biological target at doses that are safe for patients. Pharmacodynamic (PD) studies for Dinaciclib have successfully demonstrated target engagement in both surrogate tissues and tumor biopsies.
The phosphorylation of the retinoblastoma (Rb) protein is a direct downstream consequence of CDK2 activity. In a Phase I study, treatment with Dinaciclib led to a measurable and significant reduction in the phosphorylation of Rb at CDK2-specific phospho-sites. This effect was observed in skin biopsies taken from patients, serving as an accessible surrogate tissue, as well as in tumor biopsies, confirming that the drug was reaching its target in the cancer cells and exerting its biological effect.
Further evidence of target engagement came from the modulation of proteins downstream of CDK9. In the same patient biopsies, Dinaciclib treatment was shown to alter the expression of cyclin D1 and p53, changes that are consistent with the inhibition of transcriptional CDK9. An
ex vivo lymphocyte proliferation assay, in which immune cells were taken from the whole blood of treated patients and stimulated to divide, also provided strong evidence of a systemic biological effect. Dinaciclib treatment significantly suppressed the ability of these lymphocytes to proliferate, confirming its potent anti-proliferative activity in a patient-derived system.
While these studies confirmed target engagement, they also revealed a potential challenge. The short pharmacokinetic half-life of Dinaciclib appears to be linked to a transient pharmacodynamic effect on certain key targets. In a study involving patients with acute leukemia, PD analyses showed that while levels of the critical survival protein Mcl-1 were decreased at 4 hours after the Dinaciclib infusion, they had returned to baseline levels by the 24-hour time point. This rapid recovery of a key anti-apoptotic protein may provide a window for cancer cells to escape the drug's cytotoxic effects. This mismatch between the drug's transient presence in the body and the potential need for sustained inhibition of survival pathways like Mcl-1 represents a significant clinical hurdle. It suggests that the intermittent, high-dose "pulse" scheduling used in trials—designed to maximize peak drug concentration while allowing normal tissues to recover—may not be sufficient to maintain the continuous pro-apoptotic pressure needed for durable responses in some cancers. This PK/PD disconnect could partly explain the limited single-agent efficacy observed in many clinical settings and suggests that alternative dosing strategies or formulations that prolong drug exposure might be necessary to fully exploit Dinaciclib's potent mechanism.
The clinical development of Dinaciclib was predicated on a robust and extensive body of preclinical evidence demonstrating its potent and broad-spectrum antitumor activity. Both in vitro studies using cancer cell lines and in vivo studies in animal models provided a strong rationale for investigating Dinaciclib as a novel antineoplastic agent across a wide range of human cancers.
In cell-based assays, Dinaciclib has consistently demonstrated potent antiproliferative and cytotoxic activity against a vast panel of over 100 human tumor cell lines derived from diverse tissue origins. The concentration required to inhibit cell growth by 50% (
IC50) was typically in the low nanomolar range, generally between 7 and 17 nM, highlighting its broad efficacy.
Specific examples of its potent in vitro activity include:
The potent in vitro activity of Dinaciclib translated effectively to significant antitumor efficacy in multiple in vivo animal models. In these studies, human cancer cells are implanted into immunocompromised mice to form tumors (xenografts), which are then treated with the investigational drug.
Dinaciclib, administered on intermittent schedules at doses below the maximally tolerated dose, induced the regression of established solid tumors in a range of xenograft models. This demonstrated that the drug could achieve effective antitumor concentrations
in vivo with a tolerable safety profile in these preclinical systems.
Specific examples of in vivo efficacy include:
Preclinical studies also explored the potential for Dinaciclib to be used in combination with other anticancer agents, revealing strong synergistic interactions that could enhance its therapeutic effect.
Despite this remarkably broad and potent preclinical profile, the clinical performance of Dinaciclib, especially as a monotherapy in solid tumors, was substantially more modest. This "preclinical to clinical" efficacy gap is a common challenge in oncology drug development. It arises from several factors: the inherent simplicity of preclinical models, which often fail to recapitulate the complex heterogeneity, immune interactions, and protective microenvironment of human tumors; the difficulty in translating drug doses and exposures from mice to humans while maintaining a safe therapeutic window; and the potential for human-specific toxicities that limit the deliverable dose. While Dinaciclib's preclinical data provided a compelling rationale for its clinical investigation, its ultimate trajectory underscores that potent biochemical activity in simplified models does not always guarantee a sufficiently wide therapeutic index to achieve success in the more complex setting of human clinical trials.
The extensive clinical development program for Dinaciclib spanned multiple phases and investigated its utility across a wide spectrum of both hematologic malignancies and solid tumors. The results of these trials paint a complex picture of a drug with clear biological activity and encouraging efficacy in certain cancers, but which was ultimately constrained by its toxicity profile and a failure to demonstrate superiority over existing therapies in a pivotal setting.
The initial Phase I clinical trials were designed to establish the safety, tolerability, pharmacokinetic profile, and recommended Phase 2 dose (RP2D) of Dinaciclib in patients with advanced malignancies. A key study in patients with advanced solid tumors explored various dosing schedules, including a 2-hour infusion administered once every three weeks.
For the once-every-3-weeks schedule, the maximum tolerated dose (MTD) was determined to be 50 mg/m². These early studies were crucial for confirming that Dinaciclib engaged its targets
in vivo at tolerable doses, as evidenced by pharmacodynamic analyses of patient biopsies showing reduced Rb phosphorylation. While no objective tumor responses according to Response Evaluation Criteria in Solid Tumors (RECIST) were observed in this initial solid tumor cohort, a signal of biological activity was present, with ten patients achieving prolonged stable disease for at least four treatment cycles. These findings provided the basis for advancing Dinaciclib into Phase II studies.
Dinaciclib demonstrated its most significant clinical promise in the treatment of hematologic cancers, where dependence on the survival pathways targeted by the drug is often more pronounced.
The activity of Dinaciclib in CLL was particularly encouraging. A Phase I dose-escalation study in patients with relapsed and/or refractory CLL showed a substantial overall response rate of 54%. Importantly, responses were observed in patients with high-risk genetic features, such as deletion of chromosome 17p (del(17p)), who are typically refractory to standard chemoimmunotherapy.
This strong signal of efficacy led to the initiation of a pivotal, randomized, open-label Phase III trial (NCT01580228). This study was designed to compare the efficacy and safety of Dinaciclib with that of ofatumumab, an anti-CD20 monoclonal antibody that was an approved therapy for refractory CLL at the time. The primary endpoint of the trial was progression-free survival (PFS). The results of this trial were definitive but disappointing for Dinaciclib. The study was ultimately terminated for futility after an interim analysis determined that Dinaciclib was unlikely to demonstrate superiority over ofatumumab. The final analysis showed a median PFS of 13.7 months for patients treated with Dinaciclib compared to 10.0 months for those treated with ofatumumab. This difference corresponded to a hazard ratio (HR) of 0.93 and was not statistically significant. While the overall response rate (ORR) was numerically higher for Dinaciclib (48% vs. 31%), the failure to meet the primary endpoint halted its development path as a monotherapy for CLL.
In patients with relapsed multiple myeloma, Dinaciclib also showed encouraging single-agent activity in a Phase I/II trial. In a cohort of 27 evaluable patients who had received a median of four prior therapies, the overall confirmed partial response rate was 11%. This included two patients who achieved a very good partial response (VGPR), indicating a deep response to the drug. The overall clinical benefit rate, which includes minimal responses, was 19%. While modest, these results in a heavily pre-treated population were sufficient to warrant further investigation, primarily in combination regimens. This led to subsequent trials exploring Dinaciclib in combination with standard-of-care agents for myeloma, such as the proteasome inhibitor bortezomib and dexamethasone (NCT01711528).
In a Phase II study of patients with relapsed and/or refractory AML, Dinaciclib demonstrated biological activity, with 60% of patients experiencing a transient reduction in circulating or bone marrow blasts. However, these reductions were not durable, and no patients achieved a complete remission. The clinical utility in this setting was severely hampered by significant toxicity, including a patient death due to hyperacute tumor lysis syndrome, highlighting the narrow therapeutic window in this fragile patient population.
In contrast to the promising signals in hematologic cancers, the clinical performance of Dinaciclib as a monotherapy in unselected solid tumor populations was largely disappointing.
A randomized Phase II trial was conducted to compare Dinaciclib with the standard chemotherapy agent capecitabine in women with previously treated, advanced breast cancer. An unplanned interim analysis revealed that the time to disease progression was inferior for patients receiving Dinaciclib compared to those receiving capecitabine, leading the independent data monitoring committee to recommend stopping the trial early for futility. A small glimmer of activity was noted in a subset of patients with estrogen receptor-positive (ER+) and HER2-negative metastatic breast cancer, where two of seven patients experienced a partial response. This suggests that efficacy might be confined to specific, biomarker-defined subtypes, but the overall negative result in an unselected population was a significant setback. Another Phase I trial investigated Dinaciclib in combination with epirubicin for metastatic triple-negative breast cancer (NCT01624441).
A Phase II study evaluating Dinaciclib monotherapy in patients with advanced NSCLC concluded that the drug was not successful in this indication, showing a lack of meaningful antitumor activity.
Investigations in other solid tumors yielded similarly negative results. A Phase I trial in metastatic pancreatic cancer combined Dinaciclib with the Akt inhibitor MK-2206 (NCT01783171). While the combination was deemed safe, it produced no objective responses, and the median overall survival was a dismal 2.2 months. The investigators noted that the doses achieved may not have been biologically effective. In advanced melanoma, a Phase II trial (NCT00937937) was terminated early due to slow patient accrual and failed to show sufficient clinical activity to warrant further development of Dinaciclib as a single agent in this disease.
In summary, the clinical development of Dinaciclib reveals a stark contrast between its activity in hematologic malignancies and solid tumors. The drug's mechanism, particularly its ability to suppress Mcl-1 via CDK9 inhibition, appears to be most effective in blood cancers that are highly dependent on this survival pathway. However, even in its most promising indication, CLL, it could not outperform an existing therapy in a head-to-head comparison, a prerequisite for regulatory approval. In solid tumors, its monotherapy efficacy was minimal, suggesting that a broad, unselected approach was not viable. Its future, if any, appears to be in biomarker-selected populations or in rational combination therapies that can exploit its potent pro-apoptotic mechanism.
Table 3: Summary of Major Clinical Trials Investigating Dinaciclib
NCT Identifier | Phase | Indication(s) | Treatment Arms | Primary Endpoint | Key Efficacy Results | Source(s) |
---|---|---|---|---|---|---|
NCT01580228 | III | Refractory Chronic Lymphocytic Leukemia (CLL) | Dinaciclib vs. Ofatumumab | Progression-Free Survival (PFS) | Terminated for Futility. Median PFS: 13.7 mo (Dinaciclib) vs. 10.0 mo (Ofatumumab); HR=0.93 (Not significant). ORR: 48% vs. 31%. | |
NCT01096342 | I/II | Relapsed/Refractory Multiple Myeloma (MM) | Dinaciclib Monotherapy (Dose Escalation) | MTD, Overall Response Rate (ORR) | ORR: 11% (3/27), including 2 VGPRs. Clinical Benefit Rate: 19%. MTD: 50 mg/m². | |
NCT00871663 | I | Advanced Solid Tumors | Dinaciclib Monotherapy (Dose Escalation) | Safety, MTD, RP2D | No objective responses. 10 patients had prolonged stable disease. RP2D: 12 mg/m² (weekly x3). | |
Phase II (unspecified) | II | Relapsed/Refractory Acute Myeloid Leukemia (AML) | Dinaciclib Monotherapy | Response Rate | No complete remissions. Transient reduction in blasts in 60% of patients. | |
Phase II (unspecified) | II | Advanced Breast Cancer | Dinaciclib vs. Capecitabine | Time to Progression | Stopped for Futility. Dinaciclib was inferior to capecitabine. Some activity in ER+/HER2- subset (2/7 PRs). | |
NCT01783171 | I | Metastatic Pancreatic Cancer | Dinaciclib + MK-2206 (Akt inhibitor) | MTD, Safety | No objective responses. Median survival 2.2 months. | |
NCT00937937 | II | Advanced Melanoma | Dinaciclib Monotherapy | Overall Survival | Terminated. Failed to demonstrate sufficient clinical activity. |
The safety and tolerability profile of Dinaciclib has been extensively characterized through its numerous clinical trials. The observed adverse events are largely predictable consequences of its mechanism of action—the inhibition of CDKs that are critical for the proliferation of both malignant and healthy cells. While described as manageable in some contexts, the overall toxicity profile contributed significantly to the drug's narrow therapeutic window and clinical development challenges.
Across trials in both hematologic and solid tumor indications, a consistent pattern of common, treatment-related adverse events (AEs) has emerged.
Dose-limiting toxicities are severe adverse events that occur within the first cycle of treatment and are used in Phase I trials to define the maximum tolerated dose (MTD). The DLTs identified for Dinaciclib highlight the most significant safety risks associated with the drug.
Despite the extensive list of potential side effects, the safety profile of Dinaciclib has been described as "easily manageable" in certain clinical contexts, such as in the Phase I/II trial for relapsed multiple myeloma. This suggests that with proactive monitoring and appropriate supportive care measures, the drug can be administered with an acceptable level of safety by experienced clinicians.
The on-target nature of the hematologic toxicity is predictable. This allows for the implementation of intermittent dosing schedules (e.g., treatment on Days 1, 8, and 15 of a 28-day cycle) that provide a built-in recovery period for the bone marrow to regenerate blood cells. The risk of TLS can be mitigated through prophylactic measures such as hydration and the use of uric acid-lowering agents, along with close monitoring of electrolytes in high-risk patients.
The safety profile of Dinaciclib is a direct and logical consequence of its molecular mechanism. The inhibition of CDK1 and CDK2, essential for the proliferation of all rapidly dividing cells, inevitably affects healthy tissues with high turnover rates. The hematopoietic system is the most sensitive, leading directly to the observed cytopenias. The GI epithelium is similarly affected, resulting in nausea and diarrhea. Furthermore, the potent cytotoxicity mediated by CDK9 inhibition, which is highly effective at killing cancer cells, is the very reason for the risk of TLS. These are not unexpected "off-target" effects but are rather the physiological manifestation of potent "on-target" inhibition in normal tissues. This mechanistic link underscores the fundamental challenge of broad-spectrum cell cycle inhibitors: separating the desired anticancer effect from the unavoidable toxicity to healthy proliferating cells.
To fully appreciate the significance and developmental trajectory of Dinaciclib, it is essential to place it within the broader landscape of CDK inhibitor drug development. Dinaciclib represents a second-generation agent, occupying a critical transitional space between the early, non-selective pan-kinase inhibitors and the highly successful, third-generation selective CDK4/6 inhibitors.
Dinaciclib was rationally designed as a second-generation CDK inhibitor to overcome the limitations of first-generation agents like flavopiridol. The comparison between the two highlights significant advancements in drug design.
The comparison between Dinaciclib and the third-generation CDK4/6 inhibitors—palbociclib, ribociclib, and abemaciclib—illustrates a fundamental strategic shift in the field of CDK inhibition. This shift moved away from the "broad-spectrum" approach of Dinaciclib toward a "precision" approach of targeting a specific CDK pathway in a biomarker-selected patient population.
The profound differences in target spectrum lead to starkly different clinical profiles in terms of both efficacy and safety.
The developmental history of these drug classes serves as a powerful illustration of the evolution of targeted therapy. The first-generation agents like flavopiridol were a "blunt instrument." The second-generation, represented by Dinaciclib, was a more refined "multi-tool," designed to hit a specific family of targets with greater potency and precision. However, the third-generation CDK4/6 inhibitors represented a paradigm shift to a "scalpel" approach. By identifying a critical, druggable dependency (the CDK4/6-Rb axis) in a specific disease context (HR+ breast cancer) and designing drugs to inhibit only that pathway, developers achieved profound efficacy while creating a much wider and more manageable therapeutic window. Dinaciclib's journey is therefore not a story of failure, but of a rational scientific advancement that was ultimately superseded by a more sophisticated and clinically successful therapeutic strategy.
Table 4: Comparative Profile of Dinaciclib vs. Selective CDK4/6 Inhibitors
Feature | Dinaciclib | Palbociclib | Ribociclib | Abemaciclib |
---|---|---|---|---|
Generation | Second | Third | Third | Third |
Primary CDK Targets | CDK1, CDK2, CDK5, CDK9 (Broad-Spectrum) | CDK4, CDK6 (Selective) | CDK4, CDK6 (Selective) | CDK4, CDK6 (Selective); also CDK9 |
Primary Mechanism | Cytotoxic & Cytostatic (Apoptosis Induction & Cell Cycle Arrest) | Cytostatic (G1 Cell Cycle Arrest) | Cytostatic (G1 Cell Cycle Arrest) | Cytostatic (G1 Arrest); potentially some cytotoxic |
Key Indication(s) | Investigational (CLL, MM) | Approved (HR+/HER2- Breast Cancer) | Approved (HR+/HER2- Breast Cancer) | Approved (HR+/HER2- Breast Cancer) |
Characteristic G3/4 Toxicities | Neutropenia, TLS, Febrile Neutropenia, GI toxicity | Neutropenia | Neutropenia, Hepatotoxicity, QTc Prolongation | Diarrhea, Neutropenia |
Dosing Schedule | Intermittent | Intermittent (3 weeks on, 1 week off) | Intermittent (3 weeks on, 1 week off) | Continuous |
Source(s) |
The regulatory journey of Dinaciclib reflects its clinical development trajectory, characterized by early promise that led to special designations, followed by setbacks in pivotal trials that ultimately resulted in a re-evaluation of its path to market. Currently, Dinaciclib remains an unapproved, investigational agent.
In recognition of its potential to address an unmet medical need in a rare disease, Dinaciclib was granted Orphan Drug designation for the treatment of Chronic Lymphocytic Leukemia (CLL) by major regulatory agencies.
The rationale for these designations was based on the significant unmet need for effective therapies in refractory CLL and the promising early clinical data suggesting that Dinaciclib, with its novel mechanism of action, might provide a significant benefit over existing treatments.
However, a pivotal event in Dinaciclib's regulatory history was the withdrawal of these designations. On February 4, 2022, the FDA status was updated to "Designation Withdrawn or Revoked". In the same month, the designation was withdrawn from the European Union's Community Register of orphan medicinal products at the request of the sponsor, Merck Sharp & Dohme.
This coordinated withdrawal is a highly significant regulatory endpoint. Orphan Drug status provides substantial incentives for development, and a sponsor would not voluntarily relinquish these benefits unless the path to approval for that specific indication was no longer considered viable. This action, occurring several years after the negative results of the Phase III CLL trial became known, represents a formal conclusion to the primary development strategy for Dinaciclib as a monotherapy in CLL. It confirms that the drug failed to demonstrate the "significant benefit" over existing therapies that is required to maintain orphan status and ultimately gain marketing approval. To date, Dinaciclib is not approved by the FDA or EMA for any therapeutic indication.
There is no evidence within the provided documentation to suggest that Dinaciclib has been submitted for regulatory review or has been approved by the Therapeutic Goods Administration (TGA) in Australia. A search of the Australian Register of Therapeutic Goods (ARTG) is the standard method to confirm the approval status of a medicine, and the available information does not indicate that Dinaciclib is listed.
Despite the lack of regulatory approval, Australia has been a site for both preclinical research and clinical trials involving Dinaciclib. Preclinical studies have been conducted at Australian institutions such as the Peter MacCallum Cancer Centre in Melbourne. Furthermore, Australian patients have participated in multi-national clinical trials, including the KEYNOTE-155 study of Dinaciclib plus pembrolizumab and the NCT03484520 study of Dinaciclib plus venetoclax, which listed recruitment sites in Queensland, Tasmania, and Victoria.
Dinaciclib has been the subject of a comprehensive clinical trial program, with investigations reaching up to Phase III. The majority of these trials are now completed, have been terminated, or are active but no longer recruiting new patients.
The highest phase of development reached was the Phase III trial in CLL (NCT01580228), which, as noted, was terminated due to futility. Following the setbacks with monotherapy, the clinical development strategy for Dinaciclib has pivoted entirely towards investigating its potential in combination regimens, where its potent pro-apoptotic mechanism might synergize with other agents.
Recent and ongoing trials reflect this new strategy, exploring combinations with:
This current portfolio of trials indicates that while the path to approval for Dinaciclib as a single agent has closed, it remains a tool of interest for translational research, where its potent, multi-targeted mechanism may yet find a niche in rationally designed combination therapies.
Dinaciclib represents a significant milestone in the development of cyclin-dependent kinase inhibitors. It is a potent, rationally designed, second-generation agent that successfully improved upon the potency and selectivity of its predecessors. However, its clinical journey has been a paradigmatic example of the challenges facing broad-spectrum inhibitors in an era of precision oncology, providing critical lessons about the importance of the therapeutic window and biomarker-driven strategies.
The story of Dinaciclib is one of great preclinical promise followed by a complex and ultimately challenging clinical translation. Its design was a clear success from a medicinal chemistry perspective, yielding a molecule with low-nanomolar potency against a key set of CDKs involved in both cell cycle control (CDK1, CDK2) and transcriptional regulation (CDK9). This dual mechanism was highly effective in preclinical models, producing broad and potent antitumor activity that provided a compelling rationale for its development.
In the clinic, this potent mechanism translated into encouraging signals of activity, particularly in hematologic malignancies like CLL and MM, which are often addicted to the very survival pathways (e.g., Mcl-1) that Dinaciclib effectively shuts down. However, the same broad mechanism that made it a potent anticancer agent also made it a potent inhibitor of proliferation in healthy tissues. The resulting on-target toxicities—most notably severe neutropenia and the risk of tumor lysis syndrome—created a narrow therapeutic window that proved difficult to navigate.
The definitive turning point was the failure of the pivotal Phase III trial in CLL, where Dinaciclib did not demonstrate superiority over the comparator arm. This, combined with its lack of meaningful monotherapy activity in major solid tumors like breast and lung cancer, effectively halted its primary development path. The subsequent withdrawal of its Orphan Drug designations by the FDA and EMA served as a formal acknowledgment that its future as a single agent was no longer viable.
Despite these setbacks, the potent and unique mechanism of Dinaciclib ensures it remains a compound of significant scientific interest, and it may yet find a clinical niche, most likely in combination therapies or in specific, biomarker-defined populations.
In conclusion, Dinaciclib stands as a critical case study in the evolution of modern cancer drug development. It represents the apex of the second-generation, "broad-spectrum" CDK inhibitor strategy, which was scientifically sound but was ultimately outcompeted by the more clinically successful, "precision" strategy of the third-generation CDK4/6 inhibitors. Its story is not one of failure but rather of a crucial step in the learning curve of targeted therapy.
Dinaciclib provided invaluable lessons on the absolute importance of the therapeutic window, demonstrating that raw potency is insufficient without a corresponding degree of selectivity that spares normal tissues. It highlighted the significant gap that can exist between preclinical efficacy in simplified models and clinical utility in complex human disease. Most importantly, its trajectory, when contrasted with that of palbociclib and its successors, powerfully validates the paradigm of precision medicine: identifying a key molecular dependency in a specific cancer subtype and designing a highly selective drug to target it.
While it is unlikely to become a widely used monotherapy, Dinaciclib's potent and well-characterized mechanism of action ensures its continued relevance as a valuable chemical probe and a potential component of novel combination therapies. The ongoing research into its use in synergistic regimens suggests that its chapter in the story of oncology may not yet be fully closed.
Published at: September 24, 2025
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