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New York City Newborn Genomic Screening Shows High Parental Interest and Disease Variant Detection

• A large-scale newborn genomic screening program in New York City demonstrated high parental consent rates, with 72% of approached families agreeing to participate. • The study detected disease-causing variants in 3.7% of screened newborns, including variants for treatable conditions not currently part of standard newborn screening. • The Genomic Uniform-screening Against Rare Disease in All Newborns (GUARDIAN) study highlights the feasibility of using genome sequencing in diverse populations. • Experts emphasize the need to address test performance and potential false-positive/false-negative results when implementing population-wide genomic screening.

A recent large-scale newborn genomic screening program in New York City has revealed significant parental interest and a notable rate of disease-causing variant detection. The study, published in JAMA Network, found that 72% of approached families consented to participate in the Genomic Uniform-screening Against Rare Disease in All Newborns (GUARDIAN) study.
The screening successfully completed genome sequencing for 99.6% of participants and identified a 3.7% rate of variants associated with early-onset genetic conditions. This included variants for treatable conditions that are not currently part of routine newborn screening. The study screened for 156 early-onset genetic conditions with established interventions and 99 neurodevelopmental disorders associated with seizures (optional).

Parental Response and Diversity

The study emphasized assessing parental response to the screening offer and ensuring diversity among respondents. The enrolled participants represented a diverse group based on parent-reported race, highlighting the feasibility of targeted interpretation of a predefined set of genes from genome sequencing in various racial and ethnic groups.

Improving Screening Methods

According to Alban Ziegler, MD, from Columbia University Irving Medical Center, "DNA sequencing offers an additional method to improve screening for conditions already included in NBS and to add those that cannot be readily screened because there is no biomarker currently detectable in dried blood spots."

Challenges and Considerations

Jonathan S. Berg, MD, PhD, of The University of North Carolina at Chapel Hill, noted that genomic screening involves the direct identification of genetic variants that are putative causal actors in monogenic conditions, thereby predicting that an individual is at risk for developing manifestations of that condition. He emphasized the importance of addressing test performance, potential false-positive, and false-negative results when implementing population-wide screening initiatives.
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Reference News

[1]
Genomic Screening of NYC Newborns Highlights Parent's Interest and Useful Findings
insideprecisionmedicine.com · Oct 31, 2024

New York City's newborn genomic screening program found a 3.7% detection rate of disease-causing variants, including tre...

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