MedPath

AI Deep Learning Models Show Promise in Accelerating Lung Cancer Biomarker Detection

• Two groundbreaking deep learning strategies presented at IASLC 2024 demonstrate high accuracy in detecting lung cancer biomarkers using whole slide images, potentially reducing testing turnaround time from 14 days.

• The DeepGEM model achieved superior predictive performance across multiple genes with an AUC of 0.842 for gene mutation detection in external validation, showing particular strength in identifying EGFR and KRAS mutations.

• Novel AI analysis of tumor microenvironment revealed distinct metabolic patterns associated with immunotherapy response, with tumors showing high PPP+ metabolic state demonstrating resistance to PD-1 agents.

Researchers have unveiled two innovative artificial intelligence approaches that could revolutionize biomarker detection and analysis in lung cancer, as presented at the IASLC 2024 World Conference on Lung Cancer. These developments address critical challenges in biomarker testing, where cost and time constraints currently impact 27.2% and 13.9% of cases respectively.

DeepGEM Platform Shows High Accuracy in Mutation Detection

Chinese researchers have developed DeepGEM, an AI platform that demonstrates remarkable accuracy in detecting genetic mutations from whole slide images (WSIs). The system, trained on over 1,700 WSIs from a single center, showed robust performance when tested across multiple external cohorts.
The platform achieved an impressive area under the curve (AUC) of 0.842 for gene mutation detection across all biopsy types in external validation. Notably, DeepGEM showed consistent accuracy across major lung cancer mutations, with AUCs of 0.862 for EGFR, 0.879 for TP53, and 0.822 for KRAS.
"DeepGEM's rapid prediction capabilities allow for quicker decision-making in treatment, enabling patients with severe symptoms to receive targeted therapies sooner," explained Dr. Wenhua Liang from Guangzhou Medical University. The system demonstrated particular strength in analyzing lymph node metastasis biopsies, achieving an AUC of 0.911 for EGFR detection.

Novel AI Analysis Reveals Immunotherapy Response Patterns

A separate Australian study utilized deep learning to analyze tumor microenvironment characteristics in patients receiving immune checkpoint inhibitors (ICIs). The research team employed a sophisticated 45-plex PhenoCycler analysis to examine samples from both responders and non-responders to immunotherapy.
The analysis identified three distinct metabolic states - OXPHOS+, OXPHOS-, and PPP+ - with significant implications for treatment outcomes. A key finding revealed that tumors with high PPP+ metabolic state (over 40%) showed resistance to PD-1 agents and correlated with lower overall survival rates.

Clinical Implementation and Future Impact

These AI developments arrive at a crucial time, as current biomarker testing faces significant challenges. Traditional tissue testing typically requires a 14-day turnaround time, with only a quarter of patients receiving full reimbursement for genetic tests.
Dr. Matthew Smeltzer from the University of Memphis emphasized the importance of such technological advances: "Any additional tools that we can develop to help us understand the disease better are going to be highly important, and we need to be open to new technology and figure out how to rigorously develop it."
The integration of these AI platforms into clinical practice could significantly reduce diagnostic delays while improving treatment selection accuracy. For regions where genomic testing is cost-prohibitive, these tools may provide a more accessible alternative for guiding precision medicine approaches.
Subscribe Icon

Stay Updated with Our Daily Newsletter

Get the latest pharmaceutical insights, research highlights, and industry updates delivered to your inbox every day.

Related Topics

Reference News

[1]
Deep Learning Models Expedite Biomarker Discovery, Detection in Lung Cancer
cancernetwork.com · Sep 7, 2024

Two strategies at the IASLC 2024 World Conference on Lung Cancer demonstrated combining pathology findings with deep lea...

© Copyright 2025. All Rights Reserved by MedPath