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Clinical Trials/NCT00341068
NCT00341068
Terminated
Not Applicable

Genetic Analysis of Neural Tube and Orofacial Cleft Defects in the Irish Population

National Human Genome Research Institute (NHGRI)1 site in 1 country7,451 target enrollmentJanuary 1, 2000

Overview

Phase
Not Applicable
Intervention
Not specified
Conditions
Neural Tube Defects (NTDs)
Sponsor
National Human Genome Research Institute (NHGRI)
Enrollment
7451
Locations
1
Primary Endpoint
Identify intronic and coding polymorphisms in candidate genes
Status
Terminated
Last Updated
6 years ago

Overview

Brief Summary

In a collaborative effort with the Health Research Board, the national organization for medical research in the Republic of Ireland, individuals with neural tube defects (NTDs) or facial cleft defects and their parents will be studied. With the exception of a few well-described syndromes most cases of NTDs and facial clefts are not inherited in a Mendelian fashion. Nearly all incident cases occur in families with no prior history of the defects. The observed recurrence risk in families with an NTD child is 10-12 fold higher than the general population suggesting that inherited factors modify this risk. Historically, the incidence of NTDs in Ireland was 5-8 fold higher than the USA. The aim of this study is to identify the gene(s) involved in these defects using standard genetic epidemiology approaches, transmission disequilibrium testing and gene mapping strategies. We will initially evaluate genes known to be involved in folate metabolism and pattern formation (development of the body). The major outcomes measured will be aggregate allele frequencies in case groups compared to controls. Biochemical parameters in red cells and plasma will also be measured. Comparisons will be made between the presence of genetics variants, biochemical parameters and clinical phenotype. Characterizing the genes associated with these defects should provide insight into the etiology and metabolic processes that may be involved, furthering prevention and intervention efforts.

Detailed Description

In a collaborative effort with the Health Research Board, the national organization for medical research in the Republic of Ireland, individuals with neural tube defects (NTDs) or facial cleft defects and their parents will be studied. With the exception of a few well-described syndromes most cases of NTDs and facial clefts are not inherited in a Mendelian fashion. Nearly all incident cases occur in families with no prior history of the defects. However, the observed recurrence risk in families with an NTD child is 10-20 fold higher than the general population incidence suggesting that inherited factors modify this risk. Historically, the incidence of NTDs in Ireland was 5-8 fold higher than the USA. The aim of this study is to identify the gene(s) involved in these defects using standard genetic epidemiology approaches, transmission disequilibrium testing and gene mapping strategies. We will initially evaluate genes known to be involved in folate metabolism and pattern formation (development of the body). The major outcomes measured will be aggregate allele frequencies in case groups compared to controls. Biochemical parameters in red blood cells and plasma will also be measured. Comparisons will be made between the presence of genetics variants, biochemical parameters and clinical phenotype. Characterizing the genes associated with these defects should provide insight into the etiology and metabolic processes that may be involved, furthering prevention and intervention efforts.

Registry
clinicaltrials.gov
Start Date
January 1, 2000
End Date
December 2, 2019
Last Updated
6 years ago
Study Type
Observational
Sex
All

Investigators

Eligibility Criteria

Inclusion Criteria

  • Not provided

Exclusion Criteria

  • Not provided

Outcomes

Primary Outcomes

Identify intronic and coding polymorphisms in candidate genes

Time Frame: ongoing

Identify intronic and coding polymorphisms in candidate genes

Score collected samples for association and/or linkage between specific alleles and disease status

Time Frame: ongoing

Score collected samples for association and/or linkage between specific alleles and disease status

Develop list of candidate genes for these disorders

Time Frame: Ongoing

Develop list of candidate genes for these disorders

Study Sites (1)

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