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Fondaparinux

Generic Name
Fondaparinux
Brand Names
Arixtra
Drug Type
Small Molecule
Chemical Formula
C31H53N3O49S8
CAS Number
104993-28-4
Unique Ingredient Identifier
J177FOW5JL

Overview

Fondaparinux (Arixtra) is a synthetic anticoagulant agent consisting of five monomeric sugar units and a O-methyl group at the reducing end of the molecule. It is structurally similar to polymeric glycosaminoglycan heparin and heparan sulfate (HS) when they are cleaved into monomeric units. The monomeric sequence in heparin and HS is thought to form the high affinity binding site for the natural anti-coagulant factor, antithrombin III (ATIII). Once bound to heparin or HS, the anticoagulant activity of ATIII is potentiated by 1000-fold. Fondaparinux potentiates the neutralizing action of ATIII on activated Factor X 300-fold. Fondaparinux may be used: to prevent venous thromboembolism in patients who have undergone orthopedic surgery of the lower limbs (e.g. hip fracture, hip replacement and knee surgery); to prevent VTE in patients undergoing abdominal surgery who are are at high risk of thromboembolic complications; in the treatment of deep vein thrombosis (DVT) and pumonary embolism (PE); in the management of unstable angina (UA) and non-ST segment elevation myocardial infarction (NSTEMI); and in the management of ST segment elevation myocardial infarction (STEMI).

Indication

Approved for: (1) prophylaxis of VTE for up to one month post surgery in patients undergoing orthopedic surgery of the lower limbs such as hip fracture, hip replacement and knee surgery; (2) prophylaxis of VTE patients undergoing abdominal surgery who are at high risk of thromboembolic complications (e.g. patients undergoing abdominal cancer surgery); (3) treatment of acute DVT and PE; (4) management of UA and NSTEMI for the prevention of death and subsequent myocardial infarction (MI); and (5) management of STEMI for the prevention of death and myocardial reinfarction in patients who are managed with thrombolytics or who are initially to receive no form of reperfusion therapy. Fondaparinux should not be used as the sole anticoagulant during percutaneous coronary intervention (PCI) due to an increased risk of guiding catheter thrombosis.

Associated Conditions

  • Acute Pulmonary Embolism (PE)
  • Deep Vein Thrombosis
  • Non ST Segment Elevation Myocardial Infarction (NSTEMI)
  • ST Segment Elevation Myocardial Infarction (STEMI)
  • Unstable Angina Pectoris
  • Acute, superficial, symptomatic Vein Thrombosis

Research Report

Published: Aug 3, 2025

A Comprehensive Monograph on Fondaparinux Sodium

Executive Summary

Fondaparinux sodium, marketed principally under the brand name Arixtra®, represents a seminal advancement in anticoagulant therapy as the first-in-class synthetic pentasaccharide and a selective indirect inhibitor of activated coagulation Factor X (Factor Xa). Its development marks a significant departure from traditional, biologically derived anticoagulants such as unfractionated heparin (UFH) and low-molecular-weight heparins (LMWH), offering a targeted mechanism of action with a highly predictable pharmacological profile.[1]

The core pharmacological attribute of fondaparinux is its unique mechanism, which involves selectively binding to and potentiating the activity of antithrombin III (ATIII). This action amplifies the natural neutralization of Factor Xa by approximately 300-fold, thereby inhibiting the coagulation cascade upstream of thrombin generation. Crucially, fondaparinux does not directly or indirectly inhibit thrombin (Factor IIa), a key differentiator from heparins.[1] This targeted action, combined with its nature as a single, pure chemical entity, results in a highly predictable pharmacokinetic profile. This profile is characterized by 100% bioavailability following subcutaneous administration, minimal protein binding outside of ATIII, no hepatic metabolism, and a long elimination half-life of 17-21 hours, which permits convenient once-daily dosing without the need for routine coagulation monitoring.[6]

Continue reading the full research report

Clinical Trials

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Title
Posted
Study ID
Phase
Status
Sponsor
2009/02/13
Phase 3
Completed
2008/11/14
Phase 4
Completed
2008/11/11
Not Applicable
Terminated
2008/05/07
Phase 2
Terminated
2008/04/16
Phase 1
Withdrawn
2008/01/29
Phase 4
Withdrawn
2007/11/08
Phase 4
Completed
2007/10/05
Phase 3
Terminated
2007/09/19
Phase 2
Completed
Mary Knudson, M.D.
2007/08/28
Not Applicable
Terminated

FDA Drug Approvals

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Approved Product
Manufacturer
NDC Code
Route
Strength
Effective Date
Physicians Total Care, Inc.
54868-5652
SUBCUTANEOUS
5 mg in 0.4 mL
1/23/2012
Sandoz Inc.
0781-3443
SUBCUTANEOUS
2.5 mg in 0.5 mL
12/16/2021
Mylan Institutional LLC
67457-592
SUBCUTANEOUS
2.5 mg in 0.5 mL
6/8/2020
Italfarmaco S.p.A
11797-155
SUBCUTANEOUS
5 mg in 0.4 mL
1/21/2019

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